Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905461.1_cds_XP_016455699.1_49609
CDS Infomation

[gene=LOC107779732] [db_xref=GeneID:107779732] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016455699.1] [location=join(48865..49169,49360..49772,49899..49919,50017..50049,55828..56981)] [gbkey=CDS]
Sequence

ATGTTTTCTCTCTTGGACTTGGAAATCGGAAAAGAAAAGAAGCACACTACACAAATGTTT
AGGGGAACCATTAATCATCTTTTTGCAATATTCATCATCATCTTTCTGCAAACATGCAAT
GCTAGGAAGAGCAAACACTATTGTGTCCCTTCTGCCTGTGGCAACATCCATAACATAAGC
TTCCCTTTTCGCTTAAACACCGATCCACAATATTGCGGTTTTCCAGGATATGAATTAGCT
TGTGAAGGTAACAAAACCATTATATCGACATCATCCAAGAAGCTGTATGTGCAAGCCATC
AATTATGGTAACAACACAATTCACCTTGTAGATCCATCTTTACAAACACAAGATATATGC
TCTATAATACCTCCTCATCTTACATTCCACCAATACAATAGTAGTATCTTTTACTCATAT
TATTATGGATATATTGGAGTAGCAGAGCCTATTTTCATGTTCAACTGTCCATTTGCTATT
AACACGACCACCTCTACATTTCTGGAAATTACTGGCTGCAAATTAAGCGCACACACTTAC
TTAAAGATTGGAGAAATGAATGTATCTGAAGTCAGTGATGGATGCAGAGTGGAACTTGTA
GCTCTGACCTCTTGCCCTAACATTAAACATAACAACAACATTTCTCTTTCTGATTTTCAT
CAAGCAATCATCTATGGGTTTGAGCTTCTTTATTATCCGAATAGGGGAGTCACGTTTGGT
GTTATTCAATTGATTGTCTGGAGCACCAAGATGCTAGCTCAGTTTTTCATATTGTATTTG
GTAGCAAGATTTGTGATCGGCCTACCAATCATAATTGTATTTCTGATGATCAAATTCAAA
AGGAGGCATTTGTCCATGTATGACATGATTGAAGGCTTTCTGCAGACACAAAACAATTTT
ATTCCAATCAGATATAATTACTCCCACATAAAGAGAATGACCAGAGGGTTCAAAGAGAAA
ATAGGCGAGGGAGGTTATGGCAAAGTATATAAAGGAAAGCTTCGCAGTGGCAGGGATGTA
GCAGTGAAAATGTTGAGCAAGCCTAAAGCTGGTGGAGGTCAAGATTTCATGAATGAAGTA
GCTACCATTGGAAGAATTCATCATGTGAATGTAGTTGGACTCGTGGGGTATTGTGTTGAG
ACAACAGAGCGCGCTCTTGTATACGATTTCATGCCCAATGGATCACTTGATAAGTACATC
ACCAGTCAGGAAGGAAGTCCTGTGTTAAGTTGGCAGAGGAAGTATGAAATTATTGTTGGA
GTGGCTCGAGGAATTGAGTATTTGCATCGAGGCTGTGAGATACGAATTTTGCACTTTGAC
ATCAAGCCTCACAACATTCTTTTGGATGAGAATTTTATCCCAAAGATTTCTGACTTTGGA
CTTGCTAAACTATATCCAACAGATAATAGCATTGTGACTCTCACAGCTGCTCGTGGAACG
ATTGGATATGTAGCTCCAGAGTTGATCAGCAGAAGCATTGGAGCAATCTCTTATAAAGCT
GATGTTTACAGCTTTGGAATGCTACTAATGGAAATGCTAGACTTGAAGAGAAATGTCGCT
GTAAATGAAGAAAATTCCAGCCAATATTTTCCCTGTTGGGTTTATGATAAGTTTAACAAA
GGAAAGGAGATTATGGTGGATGAAGAAGCCAATGAGGATGAAAAGAAGATAAGCAGAAAG
ATGACTATTGTTGCGTTATGGTGCATTCAAACAAATCCGGTACAACGCCCTTCAATGAGT
GTAGTAGTGGAAATGCTTGAAGGTGAAGTTGAATCTCTAGCACCACCTCCTCAGCCTCTT
CAATCTCAACCAATTGCTCCATTGTTTCATCAGATGGAAAGTTCTATAACGTACTCGTCT
GATTCAATGGCTTTGTTAGAAAATGCTGCTAATAATCCTGTTGAATTAGACATATGTTGT
GATTGA

Peptide Sequence

PEP ID

XP_016455699.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MFSLLDLEIGKEKKHTTQMFRGTINHLFAIFIIIFLQTCNARKSKHYCVPSACGNIHNIS
FPFRLNTDPQYCGFPGYELACEGNKTIISTSSKKLYVQAINYGNNTIHLVDPSLQTQDIC
SIIPPHLTFHQYNSSIFYSYYYGYIGVAEPIFMFNCPFAINTTTSTFLEITGCKLSAHTY
LKIGEMNVSEVSDGCRVELVALTSCPNIKHNNNISLSDFHQAIIYGFELLYYPNRGVTFG
VIQLIVWSTKMLAQFFILYLVARFVIGLPIIIVFLMIKFKRRHLSMYDMIEGFLQTQNNF
IPIRYNYSHIKRMTRGFKEKIGEGGYGKVYKGKLRSGRDVAVKMLSKPKAGGGQDFMNEV
ATIGRIHHVNVVGLVGYCVETTERALVYDFMPNGSLDKYITSQEGSPVLSWQRKYEIIVG
VARGIEYLHRGCEIRILHFDIKPHNILLDENFIPKISDFGLAKLYPTDNSIVTLTAARGT
IGYVAPELISRSIGAISYKADVYSFGMLLMEMLDLKRNVAVNEENSSQYFPCWVYDKFNK
GKEIMVDEEANEDEKKISRKMTIVALWCIQTNPVQRPSMSVVVEMLEGEVESLAPPPQPL
QSQPIAPLFHQMESSITYSSDSMALLENAANNPVELDICCD

Transcript Sequence

Gene sequence data has not been registered.